PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0002s0017.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 351aa MW: 38253.1 Da PI: 8.6858

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0002s0017.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	102.5	5.8e-32	92	232	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.... 79 lp+G++F+Ptd+e+v ++L++kv +++ ++++ ++ +i++++P++Lp v+++ +fF++ +k+y+tg+rk+r+++ Kaladp0002s0017.1.p 92 LPAGVKFDPTDQEMV-QHLEAKVVATHrlhplIDEFIPtLEGEnGICYTHPEKLP-GVRKDGLIRHFFHRPSKAYTTGTRKRRKVStdee 179 799**********.88999988777786553332322443346******.555666677**************7333455 PP NAM 80 ..sgyWkatgkdkevlskkgelvglkktLv.fy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +ge++g kk+Lv +y gr++k+ekt+Wvmh+y++ Kaladp0002s0017.1.p 180 ggETRWHKTGKTRPVFV-NGEVKGFKKILVvLYtnYGRQRKPEKTNWVMHQYHI 232 55778********.999***9735566689************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MTWCGSSSVP NDRVVAREID IVVFPDPHPH PAQATSARDE QAGSKEKDGA RVVVAAAAQH 60 ADAKVRKLTC PSCGRHVEIQ DQGGFIQELP GLPAGVKFDP TDQEMVQHLE AKVVATHRLH 120 PLIDEFIPTL EGENGICYTH PEKLPGVRKD GLIRHFFHRP SKAYTTGTRK RRKVSTDEEG 180 GETRWHKTGK TRPVFVNGEV KGFKKILVVL YTNYGRQRKP EKTNWVMHQY HIGTGEEERD 240 GELVVSKVFY QTQPRQCGGG SGFKDIIGHG HGHSLVVEPA RSSGQQQEVA LGNVGYVEFY 300 SPQYMMGYGG STVDGGGSPL QMAPNVVVHG GGSSFIRLGG GASNESVSRK *

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MTWCGSSSVP NDRVVAREID IVVFPDPHPH PAQATSARDE QAGSKEKDGA RVVVAAAAQH  60
ADAKVRKLTC PSCGRHVEIQ DQGGFIQELP GLPAGVKFDP TDQEMVQHLE AKVVATHRLH  120
PLIDEFIPTL EGENGICYTH PEKLPGVRKD GLIRHFFHRP SKAYTTGTRK RRKVSTDEEG  180
GETRWHKTGK TRPVFVNGEV KGFKKILVVL YTNYGRQRKP EKTNWVMHQY HIGTGEEERD  240
GELVVSKVFY QTQPRQCGGG SGFKDIIGHG HGHSLVVEPA RSSGQQQEVA LGNVGYVEFY  300
SPQYMMGYGG STVDGGGSPL QMAPNVVVHG GGSSFIRLGG GASNESVSRK *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28470.1	1e-106	NAC family protein