PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0003s0027.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 407aa MW: 46495.7 Da PI: 6.4045

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0003s0027.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.8	3.5e-52	16	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatg 87 +ppGfrFhPt+eel+++yL+kkv+++k++l +vi++vd++k+ePwd+++++k +++wyfFs++dkky+tg+r+nrat++g+Wkatg Kaladp0003s0027.1.p 16 VPPGFRFHPTEEELLHYYLRKKVASQKIDL-DVIRDVDLNKLEPWDIQERCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATG 104 69**************************.9***********964444222455*************************** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +dk ++s ++ +g++ktLvfy grap+g+k+dW+mheyrl Kaladp0003s0027.1.p 105 RDKVIYS-CSRRIGMRKTLVFYMGRAPHGQKSDWIMHEYRL 144 ***.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MCSENMNLSV NGHSQVPPGF RFHPTEEELL HYYLRKKVAS QKIDLDVIRD VDLNKLEPWD 60 IQERCKIGST PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIY SCSRRIGMRK 120 TLVFYMGRAP HGQKSDWIMH EYRLDDNTTA HNTNDASNQL LVGESMQEDG WVVCRVFTKK 180 NYQKASDSPK NSFISSSRPS QMQRDSNTNP VLDQILLYMG KNCNQLENEN KMNSRLLDTH 240 HNNQDASMQF IHPDLSQFDE EIIHEKFLHL PRLEGSPACY PSSMEETMIM ANRSSERVSD 300 WVALDRLVAS QLNGGHVSEM IFDQTSRQLS CMSSDPNSNM PTFDFSQQHN DGPLLSELPL 360 NHFNRSTNQE SSQQVYCSEQ VDLWTFSSNH GSSSNSSSDP LGQLSV*

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MCSENMNLSV NGHSQVPPGF RFHPTEEELL HYYLRKKVAS QKIDLDVIRD VDLNKLEPWD  60
IQERCKIGST PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIY SCSRRIGMRK  120
TLVFYMGRAP HGQKSDWIMH EYRLDDNTTA HNTNDASNQL LVGESMQEDG WVVCRVFTKK  180
NYQKASDSPK NSFISSSRPS QMQRDSNTNP VLDQILLYMG KNCNQLENEN KMNSRLLDTH  240
HNNQDASMQF IHPDLSQFDE EIIHEKFLHL PRLEGSPACY PSSMEETMIM ANRSSERVSD  300
WVALDRLVAS QLNGGHVSEM IFDQTSRQLS CMSSDPNSNM PTFDFSQQHN DGPLLSELPL  360
NHFNRSTNQE SSQQVYCSEQ VDLWTFSSNH GSSSNSSSDP LGQLSV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32770.1	1e-107	NAC family protein