PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0005s0006.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TALE

Protein Properties

Length: 401aa MW: 44776.4 Da PI: 5.9169

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0005s0006.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.5	9.4e-08	331	376	9	54
HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 9 keqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++ql++ + k +yp++e++++L +++gL+ +q+ +WF N+R + Kaladp0005s0006.1.p 331 TSQLKAWWKSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 376 567777777777889*****************************87 PP
2	ELK	29.2	2e-10	297	318	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+ +++++++E++ Kaladp0005s0006.1.p 297 ELKHELKNGYKDKIVDIREEIL 318 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MAYQNHPAHP MELQHLADQQ LPEGSGGGGG GSGLRGIYST REDKISEASG GGAPTWLNSA 60 VVQQHDNRYT ESNFLHLQTN SGSSNSPTAA NRFMTPSDDS DKYRRGGSSR VNDRYGKDED 120 VANNEYEAEN WENARYKAEV LSHPLYEQLL SAHVSCLRIA TPVDQLPRID AQLAQSQSVV 180 AKYLAVGAGN LDDKELDQFM TNYVLLLCSF KEQLQQHVRV HAMEAVMACW ELEQSLQTLT 240 GVSPGEGTGE TMSDDEDNHM DSNTLFDGSL DSPDSMGFGP LILTDSERSL MERVRQELKH 300 ELKNGYKDKI VDIREEILRK RRAGKLPGDT TSQLKAWWKS HSKWPYPTEE DKARLVQETG 360 LQLKQINNWF INQRKRNWHS NSSSSNSSKS KRKSNAGETS *

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MAYQNHPAHP MELQHLADQQ LPEGSGGGGG GSGLRGIYST REDKISEASG GGAPTWLNSA  60
VVQQHDNRYT ESNFLHLQTN SGSSNSPTAA NRFMTPSDDS DKYRRGGSSR VNDRYGKDED  120
VANNEYEAEN WENARYKAEV LSHPLYEQLL SAHVSCLRIA TPVDQLPRID AQLAQSQSVV  180
AKYLAVGAGN LDDKELDQFM TNYVLLLCSF KEQLQQHVRV HAMEAVMACW ELEQSLQTLT  240
GVSPGEGTGE TMSDDEDNHM DSNTLFDGSL DSPDSMGFGP LILTDSERSL MERVRQELKH  300
ELKNGYKDKI VDIREEILRK RRAGKLPGDT TSQLKAWWKS HSKWPYPTEE DKARLVQETG  360
LQLKQINNWF INQRKRNWHS NSSSSNSSKS KRKSNAGETS *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-153	TALE family protein