PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0005s0032.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 251aa    MW: 28648.8 Da    PI: 5.2027
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0005s0032.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.81.6e-15855148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT++Ed ll ++v ++G ++W+ +a+  g++Rt+k+c++rw +yl
  Kaladp0005s0032.1.p  8 KGPWTEQEDYLLTNVVGLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYL 55
                         79********************************************97 PP
2Myb_DNA-binding54.33e-1761106148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg++T++E+ l +++++++G++ W++Iar+++ gRt++++k++w++++
  Kaladp0005s0032.1.p  61 RGKMTAQEEHLVLELHAKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 106
                          89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MAHEEIRKGP WTEQEDYLLT NVVGLFGDRR WDFVAKVSGL NRTGKSCRLR WVNYLHPGLK  60
RGKMTAQEEH LVLELHAKWG NRWSRIARKL PGRTDNEIKN YWRTHMRKKA LEQKQTTSSS  120
MTSSDSSSSS NPTLDSLSPD TEKESFYDTG GLVAEPSLDG NKQAQEIVDR GYSMDDIWKD  180
LDMTDESPIS QLYGTFSEGS NFYCPPPVSP VWDNCSSSFW KLDDEESKMF LPSTNLPTYY  240
DLTEAPSYGY *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.32e-83MYB family protein