PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0006s0005.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 273aa    MW: 29914.4 Da    PI: 9.6257
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0006s0005.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding445.2e-1485129347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE+++++ + ++ G+g+W+ I++   k+Rt+ q+ s+ qky
  Kaladp0006s0005.1.p  85 PWTEEEHKRFLVGLQKVGKGDWRGISKIYVKTRTPTQVASHAQKY 129
                          8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MSNEADQPAA AGGEIVLFGV RVVVDCMRKS VSLNNLSQYQ QHRPKEGQGS KGAEGAYADY  60
ASADEAAVAH HRAAAGGRDR KRGVPWTEEE HKRFLVGLQK VGKGDWRGIS KIYVKTRTPT  120
QVASHAQKYF LRRTNLNRRR RRSSLFDITT DTVTAMPTED NVSTKQDKVQ PQPPTPEMSN  180
GFHSTEIEKP MEHLNIGQAS HLIANGVGQA HMDSPKTGLN LNIAPMSIDP PTLSLSLSLS  240
YDHSYSYQNT RNTQQYQAMP GVPNGDSFIA VA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19000.14e-48MYB_related family protein