PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0007s0025.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 247aa    MW: 26781.5 Da    PI: 5.9186
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0007s0025.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF38.21.8e-122559842
                         HHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
               SRF-TF  8 nrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                          r++t+ kR+++++KK  E+ +LC++++ +ii+s 
  Kaladp0007s0025.1.p 25 GRKITYRKRKETLMKKLDEITTLCGVNAGLIIYSD 59
                         599******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MSSSVPRQPR MKSKVVMDLV EDLGGRKITY RKRKETLMKK LDEITTLCGV NAGLIIYSDF  60
EEGGGPLTWP ANPEQVQGVV AQFKSMRWVD LGRKKVEDVE SLVEGRLAKE KLKLAKMQVE  120
NEDKRTRQLL SESLAGIDVT AFSTLDLNGL NWLINEKLKC LRMRMRTEAE NSIPAADNFV  180
LPNPGLHLNS DVTLWDGSAA NHGVDMMRAG SNIAAAPALS GNGVEDQAGP SGEKDQGGNG  240
ADGCAQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65300.13e-24M-type_MADS family protein