PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0007s0082.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 569aa MW: 66794.4 Da PI: 9.0606

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0007s0082.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.9	7.1e-23	48	134	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA+++GFs+r++k+++++ + + t+r+fvCskeg+++ +k++ k++ +r+ trtgC+a ++ + +++g++ v++ e eH+H+++ Kaladp0007s0082.1.p 48 LYNDYARRIGFSIRRAKQRYRRGESSLTMRQFVCSKEGTKNAKKES--KRSYSRNITRTGCQAFIQFSINQEGRYTVQRHEMEHTHDFS 134 6**************************************99988..9999********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MSAYSNSSVK STRYSPELTI NQRAKFFEAK NSELIGLVVK SEEAAYALYN DYARRIGFSI 60 RRAKQRYRRG ESSLTMRQFV CSKEGTKNAK KESKRSYSRN ITRTGCQAFI QFSINQEGRY 120 TVQRHEMEHT HDFSDIRKRH LMRSQRSISD EQIELLKSFR KCGIKLSDAI RFLKCQYGGS 180 PNIGFINIDA YNALANPDCK TFNGSDAKTL IEIFKERREN EDDFFYNFDL DEDGRLCGFF 240 WRDGIMKKDY DLFGDLVVHD TTYRTNKYDM ICGPFVGMNQ HTNNVMFGCG FIINERVESF 300 VWLFQSFLKS MGDKAPITIM TDESAAMAAG IKKVFPTSKH RLCIWHIIKN SKERIISLRK 360 KDGFIHLFNH LLKGCDSEAE FNFYWQRRLN KLSGLCEFYC TFCDVVSEWR SNEMKFNYSN 420 SNGIPKMVVS NSNLLRHARD VYTRNIYKIF EDRFLDGISC TQMIVPSEPN VFCYNVWREG 480 IDMFRHYVRF AAETFLVECT CKYFTQDGLL CMHSLRVLNI HCVQRISDAY ILKRWRKDIQ 540 KDCQESDQNI LKLFSRCIRY LLDYRNTI*

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MSAYSNSSVK STRYSPELTI NQRAKFFEAK NSELIGLVVK SEEAAYALYN DYARRIGFSI  60
RRAKQRYRRG ESSLTMRQFV CSKEGTKNAK KESKRSYSRN ITRTGCQAFI QFSINQEGRY  120
TVQRHEMEHT HDFSDIRKRH LMRSQRSISD EQIELLKSFR KCGIKLSDAI RFLKCQYGGS  180
PNIGFINIDA YNALANPDCK TFNGSDAKTL IEIFKERREN EDDFFYNFDL DEDGRLCGFF  240
WRDGIMKKDY DLFGDLVVHD TTYRTNKYDM ICGPFVGMNQ HTNNVMFGCG FIINERVESF  300
VWLFQSFLKS MGDKAPITIM TDESAAMAAG IKKVFPTSKH RLCIWHIIKN SKERIISLRK  360
KDGFIHLFNH LLKGCDSEAE FNFYWQRRLN KLSGLCEFYC TFCDVVSEWR SNEMKFNYSN  420
SNGIPKMVVS NSNLLRHARD VYTRNIYKIF EDRFLDGISC TQMIVPSEPN VFCYNVWREG  480
IDMFRHYVRF AAETFLVECT CKYFTQDGLL CMHSLRVLNI HCVQRISDAY ILKRWRKDIQ  540
KDCQESDQNI LKLFSRCIRY LLDYRNTI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-82	FAR1 family protein