PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0007s0087.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARR-B
Protein Properties Length: 396aa    MW: 44270.8 Da    PI: 7.671
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0007s0087.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like74.11.9e-23216268255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          p+l+Wt++LH++F+ a++ L G ekA Pk+i e+m+v gLt+++v SHLQkYR 
  Kaladp0007s0087.1.p 216 PKLVWTTQLHNKFLCALDIL-GLEKAQPKKIHEVMNVAGLTRANVVSHLQKYRH 268
                          89******************.********************************5 PP
2Myb_DNA-binding35.22.8e-11217267148
                          TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                          ++ WTt+++ ++++a   lG +  ++k+I + m+  g+t+ +++s++qky+
  Kaladp0007s0087.1.p 217 KLVWTTQLHNKFLCALDILGLEkaQPKKIHEVMNvAGLTRANVVSHLQKYR 267
                          679***********************************************7 PP
3Response_reg65.52.5e-2271171109
                          EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH...ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHH CS
         Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd...pDlillDiempgmdGlellkeireeepklpiivvtahgeeedal 87 
                          +l+vdD+ +  +++  +l+  +y ev+ a++g eal +l  ++   +D ++ D+ mp+m+G+el k+i  e p++p+ +++a ++  ++l
  Kaladp0007s0087.1.p   7 ILVVDDDYTCSKVIGGILNAWKY-EVEFAKNGVEALSILYSEKdvtIDGVVADVHMPEMNGFELQKHIIVEFPNIPVFLMSADDKTHTLL 95 
                          89*********************.***************6666688**********************99999***************** PP

                          HHHHTTESEEEESS--HHHHHH CS
         Response_reg  88 ealkaGakdflsKpfdpeelvk 109
                          + l+ Ga  +  Kp++ +el +
  Kaladp0007s0087.1.p  96 RGLNGGAVLYMHKPVSTAELKN 117
                          ******************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MLRPLKILVV DDDYTCSKVI GGILNAWKYE VEFAKNGVEA LSILYSEKDV TIDGVVADVH  60
MPEMNGFELQ KHIIVEFPNI PVFLMSADDK THTLLRGLNG GAVLYMHKPV STAELKNIWQ  120
FIYRYSGKAI MNDHTENFSE DVGGSSCGSS TPGDPHFIAV SGAATQLWEG NSNAVEDPLK  180
MYNTRCVQHA DGMQIREAIV NNNAPLPVVP RTGNNPKLVW TTQLHNKFLC ALDILGLEKA  240
QPKKIHEVMN VAGLTRANVV SHLQKYRHFL KRVENQGSRH GECRVIPNRS FTSIMRAGYV  300
PLYYRLKHVD PTDKPRLYRM LQEDLIAMRI PSYSQRYSCP GSTNYLPFKL GSGLMWPKGK  360
HHPMSYNGVE DVTAALDNLQ MGTPFEELPN GASEI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.14e-46ARR-B family protein