PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0096.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 223aa    MW: 25191.8 Da    PI: 4.9374
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0096.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.51.5e-201972356
                         --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                         kR++f++eq++ Le +F ++++p  +++++LA+ lgL  rqV +WFqNrRa+ k
  Kaladp0008s0096.1.p 19 KRRRFSDEQIKSLEIMFGSESKPEPRTKQQLASDLGLHPRQVAIWFQNRRARLK 72
                         89**************************************************98 PP
2HD-ZIP_I/II116.61.5e-3719110293
          HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                          k+rr+s+eq+k+LE +F +e+k ep+ K++la++Lgl+prqva+WFqnrRAR k+kq+E++y+ Lk+++d+l+++ e L+ke+++L++++
  Kaladp0008s0096.1.p  19 KRRRFSDEQIKSLEIMFGSESKPEPRTKQQLASDLGLHPRQVAIWFQNRRARLKSKQIEREYNILKASFDTLASKYECLKKENQALAAQV 108
                          89**************************************************************************************99 PP

          HD-ZIP_I/II  92 ke 93 
                          ++
  Kaladp0008s0096.1.p 109 QK 110
                          87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MNLEVGGSKQ EGRSGKNGKR RRFSDEQIKS LEIMFGSESK PEPRTKQQLA SDLGLHPRQV  60
AIWFQNRRAR LKSKQIEREY NILKASFDTL ASKYECLKKE NQALAAQVQK LRDQLGKDEG  120
STAGSALPSK QSWRDEEPET DGYLHESKGK PTYILESYDY ETDNKTLVDT SIANPDWLKD  180
EDDIQNLAEP VGSSLTSSEN SWDSSCFLDQ TGSSSLLWEF WS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16775RRARLKSKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.11e-46HD-ZIP family protein