PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0008s0331.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 408aa MW: 45262.9 Da PI: 4.9

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0008s0331.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	34.3	6e-11	61	116	2	55
AP2 2 gykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV++++++gr++A+++d ++n ++k+ + g ++++e Aak ++ a+ k++g Kaladp0008s0331.1.p 61 AYRGVTRHRWTGRFEAHLWDkQTWNTvQTKKGRQGAYDSEEAAAKTYDLAAIKYWG 116 69****************66669987788888******************98 PP
2	AP2	47.3	5.1e-15	159	211	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+++GV ++ +grW+A+I + +k+ +lg++ t eeAa+a+++a+ +++g+ Kaladp0008s0331.1.p 159 SKFRGVAKHHHNGRWEARIGRVLG---NKYLYLGTYSTQEEAAAAYDRAAIQYRGA 211 79**************988422...5***********************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MKKRSTAAAS ASASSSSTSS SDSSSLTSVE SDSKRPKPTT PKKPKARKAP APKAPPTRSS 60 AYRGVTRHRW TGRFEAHLWD KQTWNTVQTK KGRQGAYDSE EAAAKTYDLA AIKYWGPETS 120 LNFQIEMYRK EMEEMQKLSR EEYLATLRRR SSGFSRGVSK FRGVAKHHHN GRWEARIGRV 180 LGNKYLYLGT YSTQEEAAAA YDRAAIQYRG ANAVTNFDVS NYADLLIKKD LAEEAGNEEQ 240 VVADEQPQPL NLKAETDAQC QENKKGIDVI DHLPKCEEAF DPYASTTDQV SVEDHGMMNE 300 HDFSWDLNLD PDFSELPMPN LSDIAESCCE LQCELPALFD DYTGFEDNLD FMFTSGLEEN 360 MFDLGDGEKG NGASTSLPIM TSSSSSSSIS CLSTSPSNSY SYDDYLV*

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MKKRSTAAAS ASASSSSTSS SDSSSLTSVE SDSKRPKPTT PKKPKARKAP APKAPPTRSS  60
AYRGVTRHRW TGRFEAHLWD KQTWNTVQTK KGRQGAYDSE EAAAKTYDLA AIKYWGPETS  120
LNFQIEMYRK EMEEMQKLSR EEYLATLRRR SSGFSRGVSK FRGVAKHHHN GRWEARIGRV  180
LGNKYLYLGT YSTQEEAAAA YDRAAIQYRG ANAVTNFDVS NYADLLIKKD LAEEAGNEEQ  240
VVADEQPQPL NLKAETDAQC QENKKGIDVI DHLPKCEEAF DPYASTTDQV SVEDHGMMNE  300
HDFSWDLNLD PDFSELPMPN LSDIAESCCE LQCELPALFD DYTGFEDNLD FMFTSGLEEN  360
MFDLGDGEKG NGASTSLPIM TSSSSSSSIS CLSTSPSNSY SYDDYLV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-79	AP2 family protein