PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0008s0352.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 202aa MW: 23298.7 Da PI: 6.8122

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0008s0352.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.6	7.7e-10	11	57	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +WT Ed+l+ ++ +++ +W++Ia++++ ++ +q+++++ + Kaladp0008s0352.2.p 11 SWTRSEDKLFEQLLVKYPEAepeRWEKIASRLQ-FKSTEQVRDHYEEL 57 7***************88*********.99*******766 PP
2	Myb_DNA-binding	44.6	3.2e-14	111	155	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r + +Rt+ q+ s+ qky Kaladp0008s0352.2.p 111 PWTEEEHRLFLIGLQKYGKGDWRSISRQVVITRTPTQVASHAQKY 155 8***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MFPSPSSTSS SWTRSEDKLF EQLLVKYPEA EPERWEKIAS RLQFKSTEQV RDHYEELLHD 60 VSQIDAGRIE LPSYVDDVVD EEDGSWDSDS KRISFGRKSG KSDAERKKGT PWTEEEHRLF 120 LIGLQKYGKG DWRSISRQVV ITRTPTQVAS HAQKYFLRQN SVKKERKRSS IHDITTVDKQ 180 QRNDIVGEDT SFGYHNFGVN G*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	2e-72	MYB family protein