PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0500.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 241aa    MW: 26803.8 Da    PI: 4.983
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0500.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.62.5e-173075148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg+ +++E++l+v+++++lG++ W++Ia +++ gRt++++k++w++yl
  Kaladp0008s0500.3.p 30 RGNISPDEEDLIVRLHNLLGNR-WSLIAGRLP-GRTDNEVKNYWNTYL 75
                         7899******************.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MGFSVSAGLK RCGKSCRLRW LNYLRPDIKR GNISPDEEDL IVRLHNLLGN RWSLIAGRLP  60
GRTDNEVKNY WNTYLSKKIG SSNKNNTKKK QQQPPFHVAQ QTSMNHQVLL EEEKSSLVVT  120
ASEDQLKNSN YMLNTNCSQK VGSGSNEDCL TLEEIIEFAE FGGGKTQQNN IVGADPGSSS  180
TVQHDSFCPL GPESNLAWPG HKDGQWDDWL LDAMAADAED WLPDCDVRDF LNSVETDSTV  240
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.16e-39MYB family protein