PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0008s0542.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

LBD

Protein Properties

Length: 253aa MW: 27467.7 Da PI: 7.7236

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0008s0542.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	69	1e-21	52	151	1	98
DUF260 1 aCaaCkvlrrkCakd.CvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqle 88 aCaaCk++r++C ++ Cv+ pyfp e++++f vh++FG+ +v kll+ ++ r+++++ l + + + P+ G ++ + ++ ++ + Kaladp0008s0542.1.p 52 ACAACKHQRKRCDTNtCVFQPYFPGEKKEEFDTVHRFFGVIKVKKLLEGCEPGLpRQRMADELKWISAQLNNAPIAGPLAQFIAICSENQ 141 7*********9877******************************99998****************************99999 PP DUF260 89 qlkaelallk 98 ++ka +++l+ Kaladp0008s0542.1.p 142 TKKAIISQLH 151 9998877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MTSSSPDVLG NEAESLRQGN GELRSGNNNA EVQGQLRSAE ALGQGNGEHR LACAACKHQR 60 KRCDTNTCVF QPYFPGEKKE EFDTVHRFFG VIKVKKLLEG CEPGLPRQRM ADELKWISAQ 120 LNNAPIAGPL AQFIAICSEN QTKKAIISQL HDYIQNLNGV LANSVAFCSN CGSAVEKPND 180 VAGQRLFPSQ SFTPDWTFNF NNNNVIAPHA GGLVSPRFAQ YRPQQMRQDG QSGQLSNIDQ 240 TTVGTAVSSD KG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06280.1	2e-20	LBD family protein