PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0717.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 168aa    MW: 18319.8 Da    PI: 9.8845
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0717.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.6e-101866655
                         HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                         +  E++RR++++s ++eL +l+P+    +++      + L +A +YIk+Lq
  Kaladp0008s0717.1.p 18 KTTEKNRRNQMKSLYAELSSLVPHyT--TKADAAALPDKLDEAARYIKKLQ 66
                         578*********************55..45555666789***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MDGRNKLPGS SVSSTDRKTT EKNRRNQMKS LYAELSSLVP HYTTKADAAA LPDKLDEAAR  60
YIKKLQVSLE KLRQKKEKLQ GGSVTGASSA VEGAFGHQNS LFEPHIDVHR MGSALEVVLV  120
TGLDHQFALF TSVLRALHEE GAEVGNASFY VASDKVFHII HSKVRTS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-23bHLH family protein