PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0767.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 136aa    MW: 15372.3 Da    PI: 10.1079
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0767.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF101.43.3e-323585151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyeys+
  Kaladp0008s0767.1.p 35 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 85
                         79***********************************************95 PP
2K-box22.64.6e-09102135336
                K-box   3 kssgksleeakaeslqqelakLkkeienLqreqR 36 
                          +s++ s++ea+++++ qe+akL+++i nLq+++R
  Kaladp0008s0767.1.p 102 SSNTGSVSEANTQYYLQEAAKLRQQIANLQNTNR 135
                          3444559***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MEFKHIGESS SRRGEQLSDT ESPQRKIGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE  60
LSVLCDAEVA LIVFSSRGRL YEYSNNSVKA TIEKYKKACS DSSNTGSVSE ANTQYYLQEA  120
AKLRQQIANL QNTNR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.12e-57MIKC_MADS family protein