PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0827.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 834aa    MW: 91178.2 Da    PI: 6.3709
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0827.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.21.4e-18563357
                         --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                         k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Kaladp0008s0827.3.p  5 KYVRYTPEQVEALERVYAECPKPSSLKRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 63
                         5678*****************************************************97 PP
2START152.63.5e-481533602204
                          HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..E CS
                START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..g 89 
                          +aee+++e+++ka+ ++ +Wv++  +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d + W ++++  ++l  + ++  g
  Kaladp0008s0827.3.p 153 IAEETLAEFLSKATGTAVNWVQMIGMKPGPDSIGIVAVSRNCKGVAARACGLVSLEPM-KVAEILKDTPSWFRDCRTHDVLSILPTAngG 241
                          68999*****************************************************.8899999999***************99999* PP

                          EEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SS CS
                START  90 alqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgr 175
                          +l+l++++++a +++++ Rdf+ +R+i +l++g++v++++S++  +  p+   s ++vRae++pSg+li+p+++g+s +++v+h dl+  
  Kaladp0008s0827.3.p 242 TLELIYMQTYASTTMASgRDFWKLRFISSLEDGSLVVCERSLNASTGGPTgpsSLNFVRAEVFPSGFLIRPCEGGGSIIHIVDHLDLDPC 331
                          **********************************************999999999*********************************** PP

                          XXHHHHHHHHHHHHHHHHHHHHHHTXXXX CS
                START 176 lphwllrslvksglaegaktwvatlqrqc 204
                          + +++lr+l++s+ + ++k++va+lq+ +
  Kaladp0008s0827.3.p 332 SAPEILRPLYESSKIIAQKITVAALQHIR 360
                          **************************866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 834 aa     Download sequence    
MDSGKYVRYT PEQVEALERV YAECPKPSSL KRQQLIRECP ILSNIEPKQI KVWFQNRRCR  60
EKQRKESSRL QTVNKKLTAL NRLLMEENER LQKQVSHLSY DNGFMRQKLR SVSATTNTSC  120
ESVVMSGPPH SQQNPTHQHP ERDANSPAGL LAIAEETLAE FLSKATGTAV NWVQMIGMKP  180
GPDSIGIVAV SRNCKGVAAR ACGLVSLEPM KVAEILKDTP SWFRDCRTHD VLSILPTANG  240
GTLELIYMQT YASTTMASGR DFWKLRFISS LEDGSLVVCE RSLNASTGGP TGPSSLNFVR  300
AEVFPSGFLI RPCEGGGSII HIVDHLDLDP CSAPEILRPL YESSKIIAQK ITVAALQHIR  360
QIAQENCGEI KYGGGKQPAV LRTFSQRLSR GFNDAVNGFA DDGWSLLDSV GMDDVTISIN  420
MSASKFLGSQ SNSAALFPAF GGGVLCAKAS MLLEDVPPAV LVRFLREHRS EWADYGIDAY  480
SATALRASPF AIPCSKLNTL PSNQVILPLA HTIELEEFLE VVRLEGQAFC PEDIAFARDM  540
FLLQLCSGID ENEAGPCAQI VFAPIDESFA DDALLLPSGF RVISLENKAD EPGATRTLDL  600
ASALEVHTTG AQAAGGSGAN HFKHRAVLTM AFQFTFENHL RDSVASMARQ YVRSVVGAVQ  660
RVAMALSPAR LGSQMVVKSF PGSTEAITLA RWIAQSYKIH TGEELVRVYS QAGDSVLKLL  720
WQISDAVMCC SLTTNASPVF TFANQSGLDM LETTLGSLQD IKLEKTLNEA GHKSLLAEFP  780
KITQQGLAYL PAGNCMSSMG RPISYDQAIA WKVLDDEEVN HCLAFMFVNW SFM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein