PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0855.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 328aa    MW: 36361 Da    PI: 9.3067
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0855.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.52.5e-53161411128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                          lppGfrF Ptdeel+v+yL++kv+g++++l ++i evd+yk++Pw Lp+k++ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk
  Kaladp0008s0855.1.p  16 LPPGFRFYPTDEELLVHYLCRKVSGQQFSL-QIIGEVDLYKFDPWVLPSKANFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK 104
                          79***************************9.89***************99999************************************* PP

                  NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                           +++ +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
  Kaladp0008s0855.1.p 105 VITT-EGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRL 141
                          **99.999****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MGVEVARTNP FNQLALPPGF RFYPTDEELL VHYLCRKVSG QQFSLQIIGE VDLYKFDPWV  60
LPSKANFGEK EWYFFSPRDR KYPNGSRPNR VAGSGYWKAT GTDKVITTEG RKVGIKKALV  120
FYIGKAPKGT KTNWIMHEYR LFEGSRRHSG PKLDDWVLCR IYKKNSSQLK AGRNASVLSQ  180
DQCAGSPASS LSSHLDDVLD SLPELEPSSV NLRRMSSLRA LLQDDKINLQ KLGSGNFDWV  240
TLAGLSTLPE VAAGPQPLQQ PQAQNMNGFI NDVYAPGMYQ NGWGQFQGSF GNRFDEEVES  300
EIKMGRVDGS GGSGLYGYGS GFGYGSR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-112NAC family protein