PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0873.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 138aa    MW: 15011.3 Da    PI: 9.5365
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0873.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF52.46.5e-171261149
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS.EEEEE CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg.klyey 49
                         krie+  +r++tfskRr g++KKAeELS L++  va + fs+t  kl+ +
  Kaladp0008s0873.1.p 12 KRIEDLNKRYITFSKRRPGLFKKAEELSELTGCGVAALAFSPTAkKLHKF 61
                         79***************************************985256665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MGGTGKKKIE IKRIEDLNKR YITFSKRRPG LFKKAEELSE LTGCGVAALA FSPTAKKLHK  60
FGEMALIDRY LEDTGAGQGQ VALGWESGNQ NEVSVEAALR FLAGKNLGAI YDLGELVEMR  120
SVLGRIRECL VQHLNSG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51870.29e-16MIKC_MADS family protein