PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0008s0916.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 609aa MW: 67949.2 Da PI: 5.213

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0008s0916.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	134.7	6.2e-42	10	144	1	122
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknra........... 77 l+pGfrFhPtdeelv+ yLk+kv g+ +++ ++i+e+d+yk+ePwdLp k ++k+++ ewyfFs dkky +g+++nra Kaladp0008s0916.1.p 10 LAPGFRFHPTDEELVKVYLKRKVCGRAFRF-HAIAEADVYKCEPWDLPeKsALKSQDLEWYFFSGLDKKYGHGSKTNRAtergiggstgg 98 579***********************99.88**********95346667777****************967777777666 PP NAM 78 ..tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWv 122 ++gyWk+tgkd++v++ k vg+kktLv++ grap+ge+t+W Kaladp0008s0916.1.p 99 akGARGYWKTTGKDRPVHN-KLVMVGMKKTLVYHIGRAPRGERTNWA 144 55449*********9.9999********************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MGGRDPANLL APGFRFHPTD EELVKVYLKR KVCGRAFRFH AIAEADVYKC EPWDLPEKSA 60 LKSQDLEWYF FSGLDKKYGH GSKTNRATER GIGGSTGGAK GARGYWKTTG KDRPVHNKLV 120 MVGMKKTLVY HIGRAPRGER TNWASFVVCK IFQKSGPGPK NGEQHAAPFI EEEWEDEEEV 180 LVTGEQAQAE ALIADGAYIE TDDLDQFNKS LALRNTLNTP HYRSRDTCKI WMTDLYCTYI 240 IRLTGVFHLL LTCYIMPLID FNVSPGNYLP QTNYYHGDSS NQNEDSREFY EDGQKPFVGA 300 LENHYDSKLQ VSEQQGFDEL KPYDVEGKLP VVEYSAKLDE IASHDVNYLL DEPYFDGFGD 360 EVHNEGLYLE TDDLLNPIEA DPSTFDMLHE YLADFNANDE IFYTPPNNST VVAETNFPLD 420 IVHKVSFPLL VRLYEEAACS DQKMAMVSEQ FANAPDGEVV SSSNQNRTKF NSGSKNPIVK 480 HANRMLESIP APRAFAAEFP AKEAAIRLAS AMETQNSVNV TANMIHARNT SSINNGLSWS 540 FDKNGKGQLI FSLSVGQGDG HLNSAASLHG YLSSKTSSAA TLCGLYLILF WVSILFISMK 600 FGTCAYAK*

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MGGRDPANLL APGFRFHPTD EELVKVYLKR KVCGRAFRFH AIAEADVYKC EPWDLPEKSA  60
LKSQDLEWYF FSGLDKKYGH GSKTNRATER GIGGSTGGAK GARGYWKTTG KDRPVHNKLV  120
MVGMKKTLVY HIGRAPRGER TNWASFVVCK IFQKSGPGPK NGEQHAAPFI EEEWEDEEEV  180
LVTGEQAQAE ALIADGAYIE TDDLDQFNKS LALRNTLNTP HYRSRDTCKI WMTDLYCTYI  240
IRLTGVFHLL LTCYIMPLID FNVSPGNYLP QTNYYHGDSS NQNEDSREFY EDGQKPFVGA  300
LENHYDSKLQ VSEQQGFDEL KPYDVEGKLP VVEYSAKLDE IASHDVNYLL DEPYFDGFGD  360
EVHNEGLYLE TDDLLNPIEA DPSTFDMLHE YLADFNANDE IFYTPPNNST VVAETNFPLD  420
IVHKVSFPLL VRLYEEAACS DQKMAMVSEQ FANAPDGEVV SSSNQNRTKF NSGSKNPIVK  480
HANRMLESIP APRAFAAEFP AKEAAIRLAS AMETQNSVNV TANMIHARNT SSINNGLSWS  540
FDKNGKGQLI FSLSVGQGDG HLNSAASLHG YLSSKTSSAA TLCGLYLILF WVSILFISMK  600
FGTCAYAK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	4e-87	NAC family protein