PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0009s0077.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 759aa    MW: 84047.6 Da    PI: 6.0198
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0009s0077.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.22.2e-21106161156
                          TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL  rqVk+WFqNrR++ k
  Kaladp0009s0077.1.p 106 RKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 161
                          7999************************************************9877 PP
2START208.52.5e-652774973206
                          HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.....SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEE CS
                START   3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv....dsgealrasgvvdmvlallveellddkeqWdetla....kae 80 
                           ++  +el+k+a+a++p+W +s+    e++n+de++++f+ + +    +s+e++r++g+ + +l++lv +++d++ qW+++++    ka+
  Kaladp0009s0077.1.p 277 VNKSVDELIKMATAGDPLWIRSVetgrEILNYDEYVKEFPNDSAsttkRSIEVSRETGMAFVDLPKLVHSFMDVN-QWKQMFPnivsKAA 365
                          567889*********************************988889******************************.************** PP

                          EEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEE CS
                START  81 tlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghsk 163
                           ++vi++g      ga+qlm+aelq+l+p+vp R+++fvR +rql+ ++w++vdvS+d  +++  ++s+v+++++pSg+++e+ksngh+k
  Kaladp0009s0077.1.p 366 NVDVICNGeepnrnGAVQLMFAELQLLTPMVPtREVYFVRGCRQLSTDQWAVVDVSIDKVEDNI-DASLVKCRKRPSGCIFEDKSNGHCK 454
                          **************************************************************98.9************************ PP

                          EEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                START 164 vtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                          vtw+eh++++ + +h ++r +v +g+a+gak+w atlq+qce+
  Kaladp0009s0077.1.p 455 VTWLEHWECNRSPIHTMFRNIVYNGIAFGAKHWIATLQQQCER 497
                          *****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 759 aa     Download sequence    
MGVDMSNPPP SRTKDFFASP ALSLSLAGIF RGANDTGAAS EAASTDVEAW DEAGSGGGAA  60
RRAETVEMSS ENSGLVRSRS EDDYGLEGED EDEGEDNGDK SKKKKRKKYH RHTAEQIREM  120
EALFKESPHP DEKQRQQLSK QLGLAPRQVK FWFQNRRTQI KAIQERHENS LLKSEMDKLR  180
DENKSMREII NNSCCPNCGN ATISKDSSIT TEEQHLRIEN ARLKSEVEKL RAALEKYQPG  240
SGSPGSSSAD KERENRCSLD LYNGTFGLEK SRITEIVNKS VDELIKMATA GDPLWIRSVE  300
TGREILNYDE YVKEFPNDSA STTKRSIEVS RETGMAFVDL PKLVHSFMDV NQWKQMFPNI  360
VSKAANVDVI CNGEEPNRNG AVQLMFAELQ LLTPMVPTRE VYFVRGCRQL STDQWAVVDV  420
SIDKVEDNID ASLVKCRKRP SGCIFEDKSN GHCKVTWLEH WECNRSPIHT MFRNIVYNGI  480
AFGAKHWIAT LQQQCERLVF FMATNVPTKD SSGVTTLAGR KSILKLAERM TGSFSRVIGA  540
SSYNIWTKVA SKTGEDTRVS SRRNLNDPGE PLGLIVCAAS SVWLPVPAHT LFDFLRDETQ  600
RSQWDIMSNG GPAQSLANLA KGQDRGNSIT IQAMKANENP VWILQDSCTN SYESMVVYAP  660
VDITGMQSVM TGCDASNMAV LPSGFSILPD GIESRPLLIT SRPEERSSEG GCLLTIAFQI  720
LTNPSSKAKV TAESVESVST LISCTLKNIK ASLHCEDN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102107KKKKRK
2102108KKKKRKK
3104108KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein