PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0010s0067.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HSF

Protein Properties

Length: 198aa MW: 22443.6 Da PI: 9.3614

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0010s0067.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	105.7	3.7e-33	16	114	2	102
HHHHHHHHHCTG.......GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEES CS HSF_DNA-bind 2 Flkklyeilede.......elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhk 84 Fl+k+y++le++ + k+++sw++ng+ fvv+ ++efa+ +LpkyFkh+nf+SF+RQLn+YgFkk+++++ weF+h+ Kaladp0010s0067.1.p 16 FLSKTYDLLEEAgdagegrNGKKIVSWNANGDGFVVWCTSEFADILLPKYFKHNNFSSFIRQLNTYGFKKTTSKR---------WEFQHE 96 9*******666666666999*********************************************9998.........** PP XXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 85 sFkkgkkellekikrkks 102 +F+kg+++ll +i rk+ Kaladp0010s0067.1.p 97 KFRKGQRHLLAEISRKRC 114 *************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MDQLSCSGKA RCPAPFLSKT YDLLEEAGDA GEGRNGKKIV SWNANGDGFV VWCTSEFADI 60 LLPKYFKHNN FSSFIRQLNT YGFKKTTSKR WEFQHEKFRK GQRHLLAEIS RKRCEPSVFP 120 TFLRASGASS GRWEQSDRRL LLMEENESLR KENLELQTQI QQLKALEMKL LDCLSGCVGT 180 ATGAPSSSHC IIRRHSF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	2e-39	HSF family protein