PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0010s0165.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 191aa    MW: 20580.2 Da    PI: 6.1
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0010s0165.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260130.47.6e-41151141100
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                          +CaaCk+l+r+C++ C++apyf +++p kfa vhk+FGasnv+k+l+++pee+r++++++lvyeAear++dPvyG++g i +lq++l++l
  Kaladp0010s0165.1.p  15 SCAACKLLKRRCSPTCIFAPYFRSDDPTKFAKVHKVFGASNVSKILSEVPEEQRQETVNTLVYEAEARLEDPVYGCIGAIAALQRKLAEL 104
                          6***************************************************************************************** PP

               DUF260  91 kaelallkee 100
                          + +la ++++
  Kaladp0010s0165.1.p 105 QRDLAIARAR 114
                          ****999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MRNTSLHHEP RAASSCAACK LLKRRCSPTC IFAPYFRSDD PTKFAKVHKV FGASNVSKIL  60
SEVPEEQRQE TVNTLVYEAE ARLEDPVYGC IGAIAALQRK LAELQRDLAI ARARLAGYGT  120
CLSNASSSSG ATGNWVDQQH LIDSMSCFTQ MNDGLGGDGY NSNACVDIDQ LIASAYGFEV  180
GLSTASFPFE *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.15e-64LBD family protein