PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s0074.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 683aa MW: 78073.3 Da PI: 7.7514

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s0074.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.5	1.2e-19	62	155	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHn 86 +fY+e+Ak++GFs+r+++++ + + t+r fvC + g++ + +++ k +r+r+++r+gC a l+++k+ +w+vt + ++Hn Kaladp0011s0074.1.p 62 EFYSEFAKRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKVSTEAKPQRNRKSSRCGCLAYLRISKTVdlgVPEWRVTGFTNNHN 151 6************9998877356667999**********999999****************99777789******* PP FAR1 87 Hela 90 Hel Kaladp0011s0074.1.p 152 HELL 155 96 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MAEEALQIMG VYDDHSDQRS LSLDDASSAE EAPNEIRLSL ETTNDTMPYI GQRFATHDDA 60 YEFYSEFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPVKVSTE AKPQRNRKSS 120 RCGCLAYLRI SKTVDLGVPE WRVTGFTNNH NHELLEPNQV RFLPAYRTIS ETDKSRILMF 180 AKTGISVQQM MRLMELEKCV EPGYLPFTEK DVRNLIQSFR KMDGDEENID LLRMCRNIKD 240 RDPNFRFEYT LDPNNKLENI AWSYASSIQS YEIFGDAVVF DTTHRLTAFD MPLGIWVGVN 300 NYGMPCFFGC VLLREENFRS YSWALKVFLS FMNGRAPQTI LTDQNMCLKE AISLEMPATK 360 HALCIWLIVA KFPAWFNAVL GERYNEWKNE FYRLYNMESV EDFEMGWGEM VNSFGLHTSR 420 HVANLFAVRT LWALPYLRTH FFAGLTVAGQ SKAINAFIQR FLSAQTRLAQ FVEQVAVAVD 480 FKDQAGEQQT MQQNLQNICL KTGAPMESHA AAILTPFAFS KLQEQLVLSA HYASFQLDDG 540 FLVRHHTKLD GGRKVYWSPR EGVITCSCHQ FELYGVLCRH ALRVLSAGNC FQIPERYLPV 600 RWRRVSASSA KLQMLPVEHG ERVQLLQSMA SSLITESCKS KERMDMATEQ LAVLLSRVKE 660 QPIMSPSPQC MPCAGSTLQR NF*

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MAEEALQIMG VYDDHSDQRS LSLDDASSAE EAPNEIRLSL ETTNDTMPYI GQRFATHDDA  60
YEFYSEFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPVKVSTE AKPQRNRKSS  120
RCGCLAYLRI SKTVDLGVPE WRVTGFTNNH NHELLEPNQV RFLPAYRTIS ETDKSRILMF  180
AKTGISVQQM MRLMELEKCV EPGYLPFTEK DVRNLIQSFR KMDGDEENID LLRMCRNIKD  240
RDPNFRFEYT LDPNNKLENI AWSYASSIQS YEIFGDAVVF DTTHRLTAFD MPLGIWVGVN  300
NYGMPCFFGC VLLREENFRS YSWALKVFLS FMNGRAPQTI LTDQNMCLKE AISLEMPATK  360
HALCIWLIVA KFPAWFNAVL GERYNEWKNE FYRLYNMESV EDFEMGWGEM VNSFGLHTSR  420
HVANLFAVRT LWALPYLRTH FFAGLTVAGQ SKAINAFIQR FLSAQTRLAQ FVEQVAVAVD  480
FKDQAGEQQT MQQNLQNICL KTGAPMESHA AAILTPFAFS KLQEQLVLSA HYASFQLDDG  540
FLVRHHTKLD GGRKVYWSPR EGVITCSCHQ FELYGVLCRH ALRVLSAGNC FQIPERYLPV  600
RWRRVSASSA KLQMLPVEHG ERVQLLQSMA SSLITESCKS KERMDMATEQ LAVLLSRVKE  660
QPIMSPSPQC MPCAGSTLQR NF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein