PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s0163.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TALE

Protein Properties

Length: 399aa MW: 44706.9 Da PI: 6.6596

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s0163.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.1	2.6e-07	348	380	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + Kaladp0011s0163.2.p 348 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 380 69*****************************87 PP
2	ELK	29.4	1.8e-10	301	322	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+ +++++++E++ Kaladp0011s0163.2.p 301 ELKHELKQGYKDKIVDIREEIL 322 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MAYQSSRNHM LSEMDQLQQF SERQMSENGS VVHNHPHAVV SGGGGPTWLS TAVIQQHSHH 60 QYAAAADNNN NNFQLHLQTN SDSSNSPATT RTNRWMSPEA KIGIGGGSGG GGSFRKEEEM 120 AMIVNEYGGV INWEKARFKA EILSHPLYEQ LLAAHVSCLR IATPVDQLPQ IDAQLAQSHN 180 LVAKYADAVQ GSCVDDKELD QFMTQYVLLL NSFKEQLQQH VRVHAMEAVM ACWELEQALQ 240 NLTGVSPGEG TGATMSDDED DRAEGELNMF EGGMDCSDSM GLGPLVPTDS ERSLMERVRQ 300 ELKHELKQGY KDKIVDIREE ILRKRRAGKL PGDTTSHLKA WWRTHSKWPY PTEEDKARLV 360 QETGLQLKQI NNWFINQRKR NWHSNSSTAT ASKSKRKR*

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MAYQSSRNHM LSEMDQLQQF SERQMSENGS VVHNHPHAVV SGGGGPTWLS TAVIQQHSHH  60
QYAAAADNNN NNFQLHLQTN SDSSNSPATT RTNRWMSPEA KIGIGGGSGG GGSFRKEEEM  120
AMIVNEYGGV INWEKARFKA EILSHPLYEQ LLAAHVSCLR IATPVDQLPQ IDAQLAQSHN  180
LVAKYADAVQ GSCVDDKELD QFMTQYVLLL NSFKEQLQQH VRVHAMEAVM ACWELEQALQ  240
NLTGVSPGEG TGATMSDDED DRAEGELNMF EGGMDCSDSM GLGPLVPTDS ERSLMERVRQ  300
ELKHELKQGY KDKIVDIREE ILRKRRAGKL PGDTTSHLKA WWRTHSKWPY PTEEDKARLV  360
QETGLQLKQI NNWFINQRKR NWHSNSSTAT ASKSKRKR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	378	398	RKRNWHSNSSTATASKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-158	TALE family protein