PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0221.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 131aa    MW: 14351.8 Da    PI: 8.6778
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0221.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.6e-054567123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         ++C++C + F ++  L  H++ H
  Kaladp0011s0221.1.p 45 FSCNYCQRKFYSSQALGGHQNAH 67
                         89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MSYFYSPDNS INTSLHLSPP NLRGLERSSS SGSSDHNSNR PLRVFSCNYC QRKFYSSQAL  60
GGHQNAHKLE RTLAKKSREL FSSSGASQAN DYGGDDLVRR LHDGAGMIVY GGGSSVYQDE  120
FNPLDLSLRL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.17e-24C2H2 family protein