PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0226.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 323aa    MW: 36117.6 Da    PI: 7.8073
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0226.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding431.1e-131462148
                         TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                         +g+W +eEd  l+ ++  +G+g +W + ++++g++R++k+c++rw++yl
  Kaladp0011s0226.2.p 14 KGPWAPEEDAMLKAYIDAHGTGgNWIALPQKIGLRRCGKSCRLRWLNYL 62
                         79*********************************************97 PP
2Myb_DNA-binding35.42.5e-1170111346
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                           ++ eEd  +  +    G++ W+ Ia+ ++ gRt++++k++w++
  Kaladp0011s0226.2.p  70 GFSDEEDNVICSLYISIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111
                          699*****************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MGRAPCCDKT LVKKGPWAPE EDAMLKAYID AHGTGGNWIA LPQKIGLRRC GKSCRLRWLN  60
YLRPNIKHGG FSDEEDNVIC SLYISIGSRW SVIAAQLPGR TDNDIKNYWN TKLKKKLLGR  120
RKQCNNIVSS SSSSTMEDTK DGMSDETQRL SNSALERLQL HIQLQNRPRT LNSVNGPTAH  180
WPKLLHPAQE RMIRSLTESQ NDINTPHQHK LDKLDECIGS SGSQIESMRQ GLEQLTSTPS  240
SLSGLQLQAE FENYMKSNSE IIAGKGDEER KELDGSFWWS GEMENKSSAS ISSNSWDDSY  300
SVINSAGGNL MMFHDYGLGY NM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.15e-90MYB family protein