PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0407.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 138aa    MW: 15729.9 Da    PI: 10.1109
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0407.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.94.2e-125396447
                         S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         W +eE+  ++++ ++lG g+Wk I++++ ++R++ q+ s+ qky
  Kaladp0011s0407.1.p 53 WNEEEHASILHGLQELGRGDWKNISKKFVTTRSPSQIASHAQKY 96
                         *******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MKVDRECSNC GEKGHNTRTC IAEKKGMFKL FGVKIIHSNE NIKTSYQRKG VLWNEEEHAS  60
ILHGLQELGR GDWKNISKKF VTTRSPSQIA SHAQKYFGRR NGRATDKLRK SIFDQEVEHP  120
DQLGEAYTKT LMTSFIT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.12e-27MYB_related family protein