PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s0429.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 236aa MW: 26673 Da PI: 9.8574

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s0429.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.3	2.3e-15	34	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd +l++ ++ G + W++Ia+ g++R++k+c++rw +yl Kaladp0011s0429.1.p 34 KGAWRPEEDHILAETIAIRGAKKWSKIAALAGLNRCGKSCRLRWMNYL 81 79********************************************97 PP
2	Myb_DNA-binding	49.2	1.2e-15	87	132	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l Kaladp0011s0429.1.p 87 RGDISAQEEDLILRLHKLLGNR-WALIAGRLP-GRTDNEIKNYWNSHL 132 677799**************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MGQVDDNKES NSSKKDEATI AKKATKPKQR AMSKGAWRPE EDHILAETIA IRGAKKWSKI 60 AALAGLNRCG KSCRLRWMNY LRPNIKRGDI SAQEEDLILR LHKLLGNRWA LIAGRLPGRT 120 DNEIKNYWNS HLSKRMRDAN GQDPERRSRS TNVKNYEDSQ GPSSSIARSN VKVNHHTNPS 180 IIAQEADQPH TKLLIENNKN EMMANSFGAS EFEFLSEGFF ELDWISSFLE FDGCS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	1e-51	MYB family protein