PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0430.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 290aa    MW: 32210.1 Da    PI: 7.2102
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0430.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.57.4e-141461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+W ++Ed+ l  +++  G g+Wk+ +++ g++R++k+c++rw +yl
  Kaladp0011s0430.1.p 14 KGAWCAQEDQALTAYITANGEGSWKSLPQKAGLNRCGKSCRLRWINYL 61
                         799*******************************************97 PP
2Myb_DNA-binding591.1e-1867111147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          rg +T++Ed+ll++++++lG++ W++Iar+++ gRt++++k++w++ 
  Kaladp0011s0430.1.p  67 RGGFTQDEDDLLIKLHTLLGNR-WALIARRLP-GRTDNEIKNYWNTT 111
                          788*******************.*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MGRTPCCAKV GVNKGAWCAQ EDQALTAYIT ANGEGSWKSL PQKAGLNRCG KSCRLRWINY  60
LKPGIKRGGF TQDEDDLLIK LHTLLGNRWA LIARRLPGRT DNEIKNYWNT TLSKKVKKTT  120
TTNNNTVTNN GQPPSPDPQN CHLEFAIKRP SRSIDHHHHR NNDDDHQVLH YVKAFRCKKV  180
VLPASLLQAP LSEEEEAGGH QLMMSNNGGS VSNVEKKQQQ QDDDNMIRND LLIWEDVAGG  240
GDGLISGERS SISWASFSTE DSADLLVSMD CCEDMPDWSA LEKIYGSFS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.13e-56MYB family protein