PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0514.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 340aa    MW: 38565.8 Da    PI: 5.5656
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0514.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.81.5e-5181371128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                          lp+GfrFhPtdee+v +yL +kv ++++++  +i ++d +k+ePwdLpk ++ +e+e y++s+rd+ky++g r+nratk+gyWkatgkdk
  Kaladp0011s0514.1.p   8 LPRGFRFHPTDEEIVIHYLIPKVMNSNFST-AAIGQADFNKCEPWDLPKIANMGETERYYYSQRDRKYPSGLRTNRATKAGYWKATGKDK 96 
                          799************************999.78***************88888999********************************** PP

                  NAM  91 evlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                          e+++    ++elvg+kktLvfy+grap+gekt+Wvmheyrl
  Kaladp0011s0514.1.p  97 EIYEGtgsQRELVGMKKTLVFYTGRAPRGEKTNWVMHEYRL 137
                          ***987666777***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MEEDLMGLPR GFRFHPTDEE IVIHYLIPKV MNSNFSTAAI GQADFNKCEP WDLPKIANMG  60
ETERYYYSQR DRKYPSGLRT NRATKAGYWK ATGKDKEIYE GTGSQRELVG MKKTLVFYTG  120
RAPRGEKTNW VMHEYRLQPH FSSSMIPKND GWVVSRVFHK NNNSGGSGSG MHEKTYSDDN  180
SDSFSLVPKA DSFSTDQLFR EDFKSIPPLV DLSALPPHPP HSNASQLIKD LKPMISHDCS  240
FQQPHTDANM WPPTDAYDYD QLIYSDIPSY DYPSFSTTLL QSPDPFGYEQ PEDESNNVVG  300
ALEGNERKPG SPQCATSAEI SSHDQVYDNE VMSFFHRRI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04060.18e-82NAC family protein