PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0794.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YA
Protein Properties Length: 386aa    MW: 42019.6 Da    PI: 8.2168
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0794.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.11.1e-31220275258
            CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                           p+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR+Rg+gGrF
  Kaladp0011s0794.1.p 220 PPVYVNAKQYHGILRRRQSRAKAELEKKL-IKVRKPYLHESRHQHAIRRARGTGGRF 275
                          59***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MKVYLYAGLI AVCVTVSSLW KLKEEIYEVE KPVRFPSGLL HPFMVYGNMP TKPESVNRPS  60
IGLHGNPSPA VYSEPWWCST GYNPAQSVVA TVNAGHQPSG SLESNTVQSF SNSGPNEDDE  120
DNDVSKKSQQ DAARQQERSL PGDGNNIMSV ALTSATDNCI TQQPQLELVG HSVACAPGPF  180
QDPYYGGLMS AYGPQPMIYP HQLGPQHARM PLPHEVAQEP PVYVNAKQYH GILRRRQSRA  240
KAELEKKLIK VRKPYLHESR HQHAIRRARG TGGRFAKKTD AENGGPAATQ SVSSSGSELM  300
PSDSAETWNS PMGRDVAKGS QAQMQTEQHK QAATDQNGGY GNGSAFQPAS YHSGNRNEEN  360
DCSSQQWGSI SGNNKATSQR RFAIQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.12e-61NF-YA family protein