PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0962.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 217aa    MW: 24002.2 Da    PI: 9.0235
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0962.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.61.6e-19853147
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         rg+W+++Ed  lv++v+q+G+++W+ I++ ++ gRt+k+c++rw + 
  Kaladp0011s0962.1.p  8 RGSWSPQEDATLVKLVQQHGPRNWSMISAGIP-GRTGKSCRLRWCNQ 53
                         89******************************.***********985 PP
2Myb_DNA-binding54.62.5e-1762104347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          ++++ Ed+++ +a++ +G++ W+tIar+++ gRt++ +k++w++ 
  Kaladp0011s0962.1.p  62 PFSPSEDDIITRAHATHGNR-WATIARMLP-GRTDNAIKNHWNST 104
                          79******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MAESEAVRGS WSPQEDATLV KLVQQHGPRN WSMISAGIPG RTGKSCRLRW CNQLSPSVHH  60
RPFSPSEDDI ITRAHATHGN RWATIARMLP GRTDNAIKNH WNSTLKRRRK RMRRTSSVSS  120
HPPQLNISSD RGGPDDGDSE AALLETDLTL SPPGECLPPP DEKKGLAVAE EETCLMKLMQ  180
KMIAAEVRNY IDQLRAQGGL GTLLLHSAVL DHHHHL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106114KRRRKRMRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-49MYB family protein