PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0974.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 181aa    MW: 19830.5 Da    PI: 7.3011
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0974.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601421.9e-4471061100
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                          +Ca+Ck+lrr+CakdC++apyfp+++p+kfa vhk+FGasnv+k+l++lp ++r+da+sslvyeA ar+rdPvyG+vg i+ lq+q++ql
  Kaladp0011s0974.1.p   7 PCASCKLLRRRCAKDCIFAPYFPSDDPHKFATVHKVFGASNVSKMLQELPLHQRSDAVSSLVYEASARMRDPVYGCVGAISYLQSQVSQL 96 
                          7***************************************************************************************** PP

               DUF260  91 kaelallkee 100
                          + +la++++e
  Kaladp0011s0974.1.p  97 QMQLAVAQAE 106
                          ******9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MAGGNSPCAS CKLLRRRCAK DCIFAPYFPS DDPHKFATVH KVFGASNVSK MLQELPLHQR  60
SDAVSSLVYE ASARMRDPVY GCVGAISYLQ SQVSQLQMQL AVAQAEILCI QMQQEPAAAS  120
SLATIQPTLS VDDKSFLFNN SQLIGNNNIN QLSQLFNYSA SSTNNVINDY SLRDRESLWT  180
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.11e-62LBD family protein