PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s1091.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 541aa    MW: 60460.8 Da    PI: 7.2399
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s1091.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS431.46.9e-1321705401374
                 GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                          l++ Ll+cA a+s+++  +aq l+a+l++++s +g+p+qRl ay++e+L a+ ++ +s++y+ l+++e +   ss+ ++++++++ev+P+
  Kaladp0011s1091.1.p 170 LRQGLLDCALAISEDNRPKAQYLIAELEQMVSVSGEPIQRLGAYVLEGLIAKFNSAGSSIYEVLRCKEPA---SSDLFSYMHILYEVCPY 256
                          5788*****************************************************************9...99*************** PP

                 GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfef 178
                          +kf+++ aN aI ea++ e+rvHiiDf+i+qG QW++L++a+a+Rp+gpp++RiTg++++ s   +   le++g+rL+k+Ae+ +vpf+f
  Kaladp0011s1091.1.p 257 FKFGYMSANGAIAEAMKDEDRVHIIDFQIGQGSQWLTLIRAFAARPGGPPHIRITGIDDSISAyaRGGGLETVGKRLSKLAESYKVPFKF 346
                          ***********************************************************877788999********************** PP

                 GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
                          ++ ++++  + +  +L + pgEalaVn+++ lh+l+desvs++++rd++L+lvk+lsPkvv++veqe+++n++ F+ rfle+++yy+a+f
  Kaladp0011s1091.1.p 347 HA-ASRSDCESQQVNLGITPGEALAVNFAFILHHLPDESVSTHNHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRFLETMNYYTAMF 435
                          **.666666667889*************************************************************************** PP

                 GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgsl 358
                          +s++a+lpr++++ri vE+++l++++vn++acegaer++rhe l+kW++r+ +aGF+p+pls+ +++++k+ll++++++ y++ee++g+l
  Kaladp0011s1091.1.p 436 ESIDATLPRNHKDRIHVEQHCLAKDVVNIIACEGAERVKRHELLGKWKSRFAMAGFRPYPLSSLVNATIKTLLENYSDK-YKLEERDGAL 524
                          *****************************************************************************55.********** PP

                 GRAS 359 vlgWkdrpLvsvSaWr 374
                          +lgW++r+Lv  +aW+
  Kaladp0011s1091.1.p 525 YLGWMNRALVGSCAWT 540
                          ***************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MSKRLYPKSM PEAHAYLLPQ FHQLDHQLYC NDSSPSARFM IQNPNGRVLI PTANGRYCTL  60
ESSSATIRSN NSTLSLINGS PLSQQDCSSY PLDQPRVSEK SYGSPASSSC ITDDKHQLRN  120
KLMELETVML GPDYDVSDKY TGIFHDRSGV ASPEIDSWRQ MMEITSKKDL RQGLLDCALA  180
ISEDNRPKAQ YLIAELEQMV SVSGEPIQRL GAYVLEGLIA KFNSAGSSIY EVLRCKEPAS  240
SDLFSYMHIL YEVCPYFKFG YMSANGAIAE AMKDEDRVHI IDFQIGQGSQ WLTLIRAFAA  300
RPGGPPHIRI TGIDDSISAY ARGGGLETVG KRLSKLAESY KVPFKFHAAS RSDCESQQVN  360
LGITPGEALA VNFAFILHHL PDESVSTHNH RDRLLRLVKG LSPKVVTLVE QESNTNTAAF  420
FPRFLETMNY YTAMFESIDA TLPRNHKDRI HVEQHCLAKD VVNIIACEGA ERVKRHELLG  480
KWKSRFAMAG FRPYPLSSLV NATIKTLLEN YSDKYKLEER DGALYLGWMN RALVGSCAWT  540
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein