PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s1172.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TALE

Protein Properties

Length: 387aa MW: 43522.4 Da PI: 6.5145

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s1172.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.2	3.3e-09	309	344	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+ +q+ +WF N+R ++ Kaladp0011s1172.1.p 309 YKWPYPSETEKVALAESTGLDHKQINNWFINQRKRH 344 5679*****************************885 PP
2	ELK	31	5.6e-11	264	285	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++KYsgyL+sLkqE+s Kaladp0011s1172.1.p 264 ELKLHLMKKYSGYLSSLKQELS 285 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MEEYNNQLRE NNTSPRANFL YANSVSAVST STYGIPSSRS TSANAGPVAS PGAGSSSAFR 60 HQYFQSDHHD SGVKRELAVT TSQFLGQQLH QNPIGIIREN GGIERDDDQC PESDDAAAIK 120 AKIMSHPQCS NLLEAYMDCQ KVGAPPQVVA QLVAAREEFE KQQGSSSSSG KDISRDPELD 180 QFMEAYYDML LKYREELTRP LQEAMDFMRR IESQLNMLGA SPIRAYNPSD EKSSDGVGSS 240 EEEGDNGGVT DQLPRIDPRA EDRELKLHLM KKYSGYLSSL KQELSKKRKK GKLPKEARQK 300 LLAWWELHYK WPYPSETEKV ALAESTGLDH KQINNWFINQ RKRHWKPSED IQFMVMDGMH 360 HQNASALYMH GGHYMGPDHC SYRTGP*

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MEEYNNQLRE NNTSPRANFL YANSVSAVST STYGIPSSRS TSANAGPVAS PGAGSSSAFR  60
HQYFQSDHHD SGVKRELAVT TSQFLGQQLH QNPIGIIREN GGIERDDDQC PESDDAAAIK  120
AKIMSHPQCS NLLEAYMDCQ KVGAPPQVVA QLVAAREEFE KQQGSSSSSG KDISRDPELD  180
QFMEAYYDML LKYREELTRP LQEAMDFMRR IESQLNMLGA SPIRAYNPSD EKSSDGVGSS  240
EEEGDNGGVT DQLPRIDPRA EDRELKLHLM KKYSGYLSSL KQELSKKRKK GKLPKEARQK  300
LLAWWELHYK WPYPSETEKV ALAESTGLDH KQINNWFINQ RKRHWKPSED IQFMVMDGMH  360
HQNASALYMH GGHYMGPDHC SYRTGP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	289	LKQELSKKRK
2	286	290	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-102	TALE family protein