PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s1172.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TALE

Protein Properties

Length: 371aa MW: 41872.1 Da PI: 6.7988

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s1172.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.2	3.1e-09	293	328	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+ +q+ +WF N+R ++ Kaladp0011s1172.3.p 293 YKWPYPSETEKVALAESTGLDHKQINNWFINQRKRH 328 5679*****************************885 PP
2	ELK	31.1	5.3e-11	248	269	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++KYsgyL+sLkqE+s Kaladp0011s1172.3.p 248 ELKLHLMKKYSGYLSSLKQELS 269 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MLLLSVEIMS SRFPRVFHIS ISRSTSANAG PVASPGAGSS SAFRHQYFQS DHHDSGVKRE 60 LAVTTSQFLG QQLHQNPIGI IRENGGIERD DDQCPESDDA AAIKAKIMSH PQCSNLLEAY 120 MDCQKVGAPP QVVAQLVAAR EEFEKQQGSS SSSGKDISRD PELDQFMEAY YDMLLKYREE 180 LTRPLQEAMD FMRRIESQLN MLGASPIRAY NPSDEKSSDG VGSSEEEGDN GGVTDQLPRI 240 DPRAEDRELK LHLMKKYSGY LSSLKQELSK KRKKGKLPKE ARQKLLAWWE LHYKWPYPSE 300 TEKVALAEST GLDHKQINNW FINQRKRHWK PSEDIQFMVM DGMHHQNASA LYMHGGHYMG 360 PDHCSYRTGP *

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MLLLSVEIMS SRFPRVFHIS ISRSTSANAG PVASPGAGSS SAFRHQYFQS DHHDSGVKRE  60
LAVTTSQFLG QQLHQNPIGI IRENGGIERD DDQCPESDDA AAIKAKIMSH PQCSNLLEAY  120
MDCQKVGAPP QVVAQLVAAR EEFEKQQGSS SSSGKDISRD PELDQFMEAY YDMLLKYREE  180
LTRPLQEAMD FMRRIESQLN MLGASPIRAY NPSDEKSSDG VGSSEEEGDN GGVTDQLPRI  240
DPRAEDRELK LHLMKKYSGY LSSLKQELSK KRKKGKLPKE ARQKLLAWWE LHYKWPYPSE  300
TEKVALAEST GLDHKQINNW FINQRKRHWK PSEDIQFMVM DGMHHQNASA LYMHGGHYMG  360
PDHCSYRTGP *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	264	273	LKQELSKKRK
2	270	274	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-102	TALE family protein