PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s1252.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 613aa MW: 71741.8 Da PI: 8.4322

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s1252.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.2	2.1e-21	54	140	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA+++G s+r++k+++++ + + t+r+fvCskeg+++ +k++ k++ +r+ trtgC+a ++ + +++g++ v++ e eH+H+++ Kaladp0011s1252.1.p 54 LYNDYARRIGLSIRRAKQRYRRGESSLTMRQFVCSKEGTKNAKKES--KRSYSRNITRTGCQAFIQFSIDQEGRYTVQRHEMEHTHDFS 140 6**************************************99988..9999********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MVDMSTFKKS DMLESEVPGN TDESIRNQRA KFFEAKNSEL IGLVVESEED AYALYNDYAR 60 RIGLSIRRAK QRYRRGESSL TMRQFVCSKE GTKNAKKESK RSYSRNITRT GCQAFIQFSI 120 DQEGRYTVQR HEMEHTHDFS DIRQRHLMRS QRSISDEQIE LLKSFRKCGI KLSDAIRFLK 180 CQFGGSPNIG FINIDAYNAL ANPECKTFNG SYAKNLIEIF KERQENEDDF YNFDLDEDGR 240 LCGYFWRDGI MKKDYDLFGL VVHDTTYRTN KYDMVCGPFV GMNQHTNNVM FGCGFIINER 300 VESFVWLFQS FLKSMGDKAP ITIMTDESAA MAAGIKKVFP TSKHRLCIWH IIKNSKERII 360 SLRKNDGFIH LFNHLLKGCD SEAEFNFYWQ RMITVYHCAD NPWIIKFYKT KEKWCGAFCK 420 EFFSGGILSS QRSETTNKSV SRRLNKLSCL CEFYYTFCDV VSEWRSNEMK FNYSNSNGIP 480 EMVVSNSNLL RHARDVYTRN IYKIFEDRFL DGIDMFRHYV RFSAETLLVE CTCKCFTQDC 540 LLCMHSLRVL NIHCVQRIPD AYILKRWRKD IRKDCQESDQ SLCTAKIHYE IANSYENRNT 600 FDTGTILVNK SV*

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MVDMSTFKKS DMLESEVPGN TDESIRNQRA KFFEAKNSEL IGLVVESEED AYALYNDYAR  60
RIGLSIRRAK QRYRRGESSL TMRQFVCSKE GTKNAKKESK RSYSRNITRT GCQAFIQFSI  120
DQEGRYTVQR HEMEHTHDFS DIRQRHLMRS QRSISDEQIE LLKSFRKCGI KLSDAIRFLK  180
CQFGGSPNIG FINIDAYNAL ANPECKTFNG SYAKNLIEIF KERQENEDDF YNFDLDEDGR  240
LCGYFWRDGI MKKDYDLFGL VVHDTTYRTN KYDMVCGPFV GMNQHTNNVM FGCGFIINER  300
VESFVWLFQS FLKSMGDKAP ITIMTDESAA MAAGIKKVFP TSKHRLCIWH IIKNSKERII  360
SLRKNDGFIH LFNHLLKGCD SEAEFNFYWQ RMITVYHCAD NPWIIKFYKT KEKWCGAFCK  420
EFFSGGILSS QRSETTNKSV SRRLNKLSCL CEFYYTFCDV VSEWRSNEMK FNYSNSNGIP  480
EMVVSNSNLL RHARDVYTRN IYKIFEDRFL DGIDMFRHYV RFSAETLLVE CTCKCFTQDC  540
LLCMHSLRVL NIHCVQRIPD AYILKRWRKD IRKDCQESDQ SLCTAKIHYE IANSYENRNT  600
FDTGTILVNK SV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-88	FAR1 family protein