PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s1344.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 414aa MW: 45098.1 Da PI: 7.1916

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s1344.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	112	8.5e-35	36	153	2	105
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssasec 73 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++ + Kaladp0011s1344.1.p 36 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELppwhptatttiptatttaT------- 118 79**************************************************************9988888754444322220....... PP TCP 74 eaesssssasnsssg.......kaaksaakskksqksaa 105 + ss+ ++ + + a++ + +++++++ + Kaladp0011s1344.1.p 119 ----NASSQPEQMVHghvansmEDANDYTIQHQQHERVQ 153 ....11222211111233322222222222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MGERNSYRQT TSRLGMRNSG GGEIIEVQGG HIVRSTGRKD RHSKVCTAKG PRDRRVRLSA 60 HTAIQFYDVQ DRLGYDRPSK AVDWLIKKAK AAIDELAELP PWHPTATTTI PTATTTATNA 120 SSQPEQMVHG HVANSMEDAN DYTIQHQQHE RVQNENNPSF LPPSMDSDSI ADTIKTFFPM 180 GASTEPTSGS GMQFYPPDLL SRTSSSSQNN QDLRLSLQSF QDSQFLHSHH HHHHHQQHPG 240 QTHQAIFSGN QLGFDASSGG GGWSDHQSAD INRFHRMMTW NNTGGDTAGG SGGGGGGSGG 300 SSGFMFNSLP PPPLSQPSLQ QLFGQSGQFF TQRGPLQSSN TSSVRAWIDQ PIADHHQHHQ 360 TLHHHPATLS GIGHFQNPGV FSGFRIPARI QGDDEEQDGI HNKPSSASSD SRH*

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MGERNSYRQT TSRLGMRNSG GGEIIEVQGG HIVRSTGRKD RHSKVCTAKG PRDRRVRLSA  60
HTAIQFYDVQ DRLGYDRPSK AVDWLIKKAK AAIDELAELP PWHPTATTTI PTATTTATNA  120
SSQPEQMVHG HVANSMEDAN DYTIQHQQHE RVQNENNPSF LPPSMDSDSI ADTIKTFFPM  180
GASTEPTSGS GMQFYPPDLL SRTSSSSQNN QDLRLSLQSF QDSQFLHSHH HHHHHQQHPG  240
QTHQAIFSGN QLGFDASSGG GGWSDHQSAD INRFHRMMTW NNTGGDTAGG SGGGGGGSGG  300
SSGFMFNSLP PPPLSQPSLQ QLFGQSGQFF TQRGPLQSSN TSSVRAWIDQ PIADHHQHHQ  360
TLHHHPATLS GIGHFQNPGV FSGFRIPARI QGDDEEQDGI HNKPSSASSD SRH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	1e-77	TCP family protein