PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0012s0002.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 338aa    MW: 37606.9 Da    PI: 10.4093
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0012s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.34.9e-31268325359
                          -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  Kaladp0012s0002.1.p 268 DDFSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 325
                          99***********************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MDEAEEANKA AVESCHRLLG LLSQPQSHAN GRNLMAETEL TVRSFKKVVS MLDRKLGHAR  60
FRKSKNLPSP PLFPQNVLLE GQAYRQENNL NPINASKSRM FDLLEKKSLP ESGLGLRNTT  120
GFGNVAMEMS SSGKSPVQVT VQTASGYQIL QQQQMKQQAE MMMMYQKRSS GISLNFDSTS  180
CTPTMSSTRS FLSSLSMDGS SFQLIGASRS MDQNSHPHRR KCSSRGEDGS VKCGSSSRCH  240
CSKKRKHRIK RSIKVPAISN KLADIPPDDF SWRKYGQKPI KGSPHPRGYY KCSSMRGCPA  300
RKHVERCLEE PSMLIVTYEG EHNHPRIPPQ ISQSANT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.12e-65WRKY family protein