PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0013s0026.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 659aa MW: 73294.7 Da PI: 7.3598

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0013s0026.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	23.7	1.2e-07	311	350	1	35
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgk 35 s+y+GV++++++gr++A+++d ++ g ++ ++++lgk Kaladp0013s0026.1.p 311 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGK 350 78*****************988886677446***98 PP
2	AP2	43.2	1e-13	444	495	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+ ++ a+ k++g Kaladp0013s0026.1.p 444 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAESYDIAAIKFRG 495 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 659 aa Download sequence
MKCSMSNDNT STAPNINHSS WLGFSLAPNM TSQLPLHSHH HHQPMPSAPP TLPSSYFHSL 60 PNLDASRTCY GHQDGDYSSG VAAMPLNSDG SLCIMGATSR STVSQVTAPA PAPKLEDFFG 120 GGTMGNHQTM GSHQCEANDR EAMALSLDSI YYQQQTTDQE TSNLQFLINL QDGIRPQQTE 180 IQHYPLHYYN YMTHDSFITT QDDKIKETHD DTCSIQLPSS LGSDFYYGLK NCSADNAMGD 240 KVSHVGFGDL QALTLSMSPG SQSSNASSSQ RVPHPAMEPL GLDSKKRGVE KVNQKQIVHR 300 KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSCKKEGQS RKGRQVYLGK VCLAHMWGTH 360 VSFFWMTFCA DGHQFMCYLG GYDMEEKAAR AYDLAALKYW GSSTHINFPV ENYQQELEVM 420 KNMSRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE 480 EAAESYDIAA IKFRGVSAVT NFDITRYNVE RIMESSTLLP SEQARRSNVP EPVVTADASN 540 QDQRLINTES PSIASLGSQN NSESMSFHQM PPHPTTYQKP QPLLYSAMTI SESDKMANYM 600 SNASSQVTSL SNSREHSPDK TNSLPMVFGM HSLSASKFLA SPKLPMPQMP GFAWTDAA*

Sequence ? help Back to Top

Protein Sequence Length: 659 aa Download sequence

MKCSMSNDNT STAPNINHSS WLGFSLAPNM TSQLPLHSHH HHQPMPSAPP TLPSSYFHSL  60
PNLDASRTCY GHQDGDYSSG VAAMPLNSDG SLCIMGATSR STVSQVTAPA PAPKLEDFFG  120
GGTMGNHQTM GSHQCEANDR EAMALSLDSI YYQQQTTDQE TSNLQFLINL QDGIRPQQTE  180
IQHYPLHYYN YMTHDSFITT QDDKIKETHD DTCSIQLPSS LGSDFYYGLK NCSADNAMGD  240
KVSHVGFGDL QALTLSMSPG SQSSNASSSQ RVPHPAMEPL GLDSKKRGVE KVNQKQIVHR  300
KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSCKKEGQS RKGRQVYLGK VCLAHMWGTH  360
VSFFWMTFCA DGHQFMCYLG GYDMEEKAAR AYDLAALKYW GSSTHINFPV ENYQQELEVM  420
KNMSRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE  480
EAAESYDIAA IKFRGVSAVT NFDITRYNVE RIMESSTLLP SEQARRSNVP EPVVTADASN  540
QDQRLINTES PSIASLGSQN NSESMSFHQM PPHPTTYQKP QPLLYSAMTI SESDKMANYM  600
SNASSQVTSL SNSREHSPDK TNSLPMVFGM HSLSASKFLA SPKLPMPQMP GFAWTDAA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-126	AP2 family protein