PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0013s0026.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 628aa MW: 69657.4 Da PI: 7.3405

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0013s0026.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.1	6.9e-16	311	370	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g Kaladp0013s0026.2.p 311 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 370 78*****************988886678446***********************98 PP
2	AP2	43.2	9.5e-14	413	464	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+ ++ a+ k++g Kaladp0013s0026.2.p 413 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAESYDIAAIKFRG 464 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MKCSMSNDNT STAPNINHSS WLGFSLAPNM TSQLPLHSHH HHQPMPSAPP TLPSSYFHSL 60 PNLDASRTCY GHQDGDYSSG VAAMPLNSDG SLCIMGATSR STVSQVTAPA PAPKLEDFFG 120 GGTMGNHQTM GSHQCEANDR EAMALSLDSI YYQQQTTDQE TSNLQFLINL QDGIRPQQTE 180 IQHYPLHYYN YMTHDSFITT QDDKIKETHD DTCSIQLPSS LGSDFYYGLK NCSADNAMGD 240 KVSHVGFGDL QALTLSMSPG SQSSNASSSQ RVPHPAMEPL GLDSKKRGVE KVNQKQIVHR 300 KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSCKKEGQS RKGRQVYLGG YDMEEKAARA 360 YDLAALKYWG SSTHINFPVE NYQQELEVMK NMSRQEYVAH LRRKSSGFSR GASIYRGVTR 420 HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAESYDIAAI KFRGVSAVTN FDITRYNVER 480 IMESSTLLPS EQARRSNVPE PVVTADASNQ DQRLINTESP SIASLGSQNN SESMSFHQMP 540 PHPTTYQKPQ PLLYSAMTIS ESDKMANYMS NASSQVTSLS NSREHSPDKT NSLPMVFGMH 600 SLSASKFLAS PKLPMPQMPG FAWTDAA*

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MKCSMSNDNT STAPNINHSS WLGFSLAPNM TSQLPLHSHH HHQPMPSAPP TLPSSYFHSL  60
PNLDASRTCY GHQDGDYSSG VAAMPLNSDG SLCIMGATSR STVSQVTAPA PAPKLEDFFG  120
GGTMGNHQTM GSHQCEANDR EAMALSLDSI YYQQQTTDQE TSNLQFLINL QDGIRPQQTE  180
IQHYPLHYYN YMTHDSFITT QDDKIKETHD DTCSIQLPSS LGSDFYYGLK NCSADNAMGD  240
KVSHVGFGDL QALTLSMSPG SQSSNASSSQ RVPHPAMEPL GLDSKKRGVE KVNQKQIVHR  300
KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSCKKEGQS RKGRQVYLGG YDMEEKAARA  360
YDLAALKYWG SSTHINFPVE NYQQELEVMK NMSRQEYVAH LRRKSSGFSR GASIYRGVTR  420
HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAESYDIAAI KFRGVSAVTN FDITRYNVER  480
IMESSTLLPS EQARRSNVPE PVVTADASNQ DQRLINTESP SIASLGSQNN SESMSFHQMP  540
PHPTTYQKPQ PLLYSAMTIS ESDKMANYMS NASSQVTSLS NSREHSPDKT NSLPMVFGMH  600
SLSASKFLAS PKLPMPQMPG FAWTDAA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-133	AP2 family protein