PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0014s0001.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Nin-like
Protein Properties Length: 388aa    MW: 42976.7 Da    PI: 7.2864
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0014s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK91.27.8e-294292252
               RWP-RK  2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                         ek++sl++l++yFs+++kdAA+++gvc+T+LKriCRq+GI+RWP+Rki+++
  Kaladp0014s0001.1.p 42 EKSVSLSVLRQYFSGSLKDAARSIGVCPTTLKRICRQHGISRWPSRKINKV 92
                         689**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MFRCACRVER RDLSILTDND ICWLIKNFKC VSFAEAVVRS IEKSVSLSVL RQYFSGSLKD  60
AARSIGVCPT TLKRICRQHG ISRWPSRKIN KVNRSLRKIQ TVLDSVQGVE GGLKFDSTTG  120
GLVAARSLVH DLDKGKILHH DMTCNFPTQE MAPCVEISAI KLEESYCGMG GNHLRAEQDI  180
CFQNTGQDVL YKSRFPSVPS TDDAKSEEMD VMAKSPLNKQ GRRLESFLSR NSSSLGDDGI  240
TDHNQPASSS MTDSSNGSLM NGSSSSPPSQ EDIYMREKAS ADDTGSKITV KATFKEDTIR  300
LKFEPSSGCF QLYEEVAKRF KLQVGNFKLK YRDDEDELVV LESELDWQEC LEVIQSVGSR  360
SVKFFVLEIP CVMGSSGSSN CFLGRGS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43500.13e-69Nin-like family protein