PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0014s0013.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HD-ZIP

Protein Properties

Length: 254aa MW: 28696.1 Da PI: 6.3488

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0014s0013.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.2	1.6e-19	95	149	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++R++++++ql++Le+ F+++ ++ +++ LA++l+L+ rqV +WFqNrRa+ k Kaladp0014s0013.1.p 95 KSRRRISADQLKTLEKSFQEEAKLRPAKKVSLARELNLEPRQVAIWFQNRRARVK 149 79***************************************************88 PP
2	HD-ZIP_I/II	102.9	2.7e-33	97	186	3	92
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +rr+s++q+k+LE+sF+ee kL p +Kv+lareL+l+prqva+WFqnrRAR+k+k+lEk y+ L+++++ l e+++L++ev+ L++ lk Kaladp0014s0013.1.p 97 RRRISADQLKTLEKSFQEEAKLRPAKKVSLARELNLEPRQVAIWFQNRRARVKSKNLEKMYDELREQFNVLYLEKQKLQNEVHILQTLLK 186 89**********************************************************************************998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MHSPQETGNP SQPDMEWSLP LAEANPSSSA NLPFSVSSAT NNHYPLMPYY PSFNHHHPHD 60 HSGFLMMETA ASPEMETREI TDMESSGNRQ SEEAKSRRRI SADQLKTLEK SFQEEAKLRP 120 AKKVSLAREL NLEPRQVAIW FQNRRARVKS KNLEKMYDEL REQFNVLYLE KQKLQNEVHI 180 LQTLLKRQVC CNQHVSTYEE ISVDNTSATA ALPAPPLADF YSVGEAGERF QTPHGLPCTQ 240 GTPAWAAQLP PEP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	2e-32	HD-ZIP family protein