PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0015s0067.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 675aa    MW: 73905.6 Da    PI: 5.2997
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0015s0067.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS287.43.8e-883096723373
                 GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn........sseelaalklf 84 
                          +++++ Ae vs g+l laq +Larl+++ sp g+p+qR+a yf+e L+  l+  +++  + +++ +ts+           + +l a+k f
  Kaladp0015s0067.1.p 309 QQIFKSAELVSMGNLVLAQGILARLNHQLSPIGKPLQRVAYYFKESLQLLLHMISNN-LDVISSATTSTALssfspplsLILKLGAFKSF 397
                          7899********************************************998873333.3333333333222345577777888889999* PP

                 GRAS  85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel 172
                          s++sP+++f+++t NqaIleave ++r+H+iDf+i++G+QW++L+q+La R+  +g  sl+iT++      +  el  t+e+L+ fAeel
  Kaladp0015s0067.1.p 398 SDISPVVQFANFTSNQAILEAVEMHDRIHVIDFEIGYGGQWASLMQELALRNssGGVISLKITAFIL--CYDDLELGLTRENLSLFAEEL 485
                          ****************************************************767778********9..4499***************** PP

                 GRAS 173 gvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
                          +++++ +++    +++l+  +  v++gE++a nl + +++     +sl+     vL+++k+lsPk+vv  e+ +d+ + +F++ +++a+e
  Kaladp0015s0067.1.p 486 NIDLDLKIF---GFDMLNSVSHYVSNGEVVAMNLPIGIFSNC--ALSLPF----VLRIIKQLSPKIVVTLERGCDRYDLPFAHNVIQAVE 566
                          ********9...99999999999*************999887..556666....************************************ PP

                 GRAS 263 yysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve 352
                           ys l +slea    +se+ +k+Er++++++i+++v ++ +     + +   Wr+ + ++GF+p++ls+++++q ++l+++++++g+++e
  Kaladp0015s0067.1.p 567 SYSNLVESLEAV-NGNSEAFQKIERFMIHPAIEKLVLQRFRI----QDKSPPWRSVFISSGFTPLQLSNFTESQGECLVQRTPVQGFHLE 651
                          *********987.7899*******************987665....8889**************************************** PP

                 GRAS 353 eesgslvlgWkdrpLvsvSaW 373
                          +++ slvl+W++++L+s++aW
  Kaladp0015s0067.1.p 652 KKQSSLVLCWQQKELISATAW 672
                          ********************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 675 aa     Download sequence    
MPLPFDIQGK QQQQQHLGFL PQDLIATEEQ LQWSNIKAED AGLSQYAARE PTSVLDARRS  60
PSPPYSSSTL SSSLGSSASG GAPTPVASQE PCGGGGGGAR NNNLDFDQSM FGFILNDNSN  120
AHIDDPAGLS KLISAEPVMP SDLDSLGAIY HPSQHQSGDE FGAFSGNLQE SGFGSGQGSI  180
FGQFGNSLVA SSDIESLFSQ QQHQTIESLI NHHQHQQPPQ NPSLFLPSGF TDQPIFYLPN  240
PKRLNTGPAL NSDHHQQQNQ IEKNPFLAQN QLQRQVSMMP ASAASSKMIL QPSGRIEEMG  300
MHQQAALFQQ IFKSAELVSM GNLVLAQGIL ARLNHQLSPI GKPLQRVAYY FKESLQLLLH  360
MISNNLDVIS SATTSTALSS FSPPLSLILK LGAFKSFSDI SPVVQFANFT SNQAILEAVE  420
MHDRIHVIDF EIGYGGQWAS LMQELALRNS SGGVISLKIT AFILCYDDLE LGLTRENLSL  480
FAEELNIDLD LKIFGFDMLN SVSHYVSNGE VVAMNLPIGI FSNCALSLPF VLRIIKQLSP  540
KIVVTLERGC DRYDLPFAHN VIQAVESYSN LVESLEAVNG NSEAFQKIER FMIHPAIEKL  600
VLQRFRIQDK SPPWRSVFIS SGFTPLQLSN FTESQGECLV QRTPVQGFHL EKKQSSLVLC  660
WQQKELISAT AWGC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-121GRAS family protein