PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0015s0089.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family FAR1
Protein Properties Length: 222aa    MW: 25199.1 Da    PI: 8.6007
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0015s0089.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR186.25.1e-2796182290
                 FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                           Yn+YA + GF +rk+ +++s+r+gei+++++vC+keg+++ e+++ ++++++r   rtgC ak+++ ++ +gkw v+k+  eHnH+l+
  Kaladp0015s0089.1.p  96 AYNQYAARRGFGIRKHFTTRSRRSGEIIRKEYVCNKEGFKKVESQT-TDHKKRRRDARTGCLAKMEIGQK-SGKWIVDKFTDEHNHPLT 182
                          5*****************************************9999.99999999*************99.9***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MNRSINPPKP RVARTKPGEG DDGASLFTDF SSTQHSNLED FMDDESFLNN SLTEDAPRQM  60
EFGNTDNDAI FDASCEKVVD SLSGKYYDTM EEAYDAYNQY AARRGFGIRK HFTTRSRRSG  120
EIIRKEYVCN KEGFKKVESQ TTDHKKRRRD ARTGCLAKME IGQKSGKWIV DKFTDEHNHP  180
LTSPNKVMKH LSHCSVPDSI LGEKGKEREG KGRKKGVPEF F*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204215KGKEREGKGRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.15e-20FAR1 family protein