PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0015s0142.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 835aa    MW: 90166.1 Da    PI: 6.512
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0015s0142.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.12.4e-21140195156
                          TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          +++ +++t++q++eLe+lF+++++p++++r +L+k+l+L++rqVk+WFqNrR+++k
  Kaladp0015s0142.1.p 140 KKRYHRHTPQQIQELEALFKECPHPDEKQRLQLSKRLNLETRQVKFWFQNRRTQMK 195
                          688999***********************************************999 PP
2START208.33e-653495721205
                          HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S.... CS
                START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla.... 77 
                          e+a++a++el+k+a+ +ep+W k s    e++n++e+ ++f++  +     + +ea+r++gvv+ ++  lve+l+d++ +W e+++    
  Kaladp0015s0142.1.p 349 EVALAAMDELIKLAQTDEPLWIKGSeggrEILNREEYKRTFTPCMGmkpngYVTEASRETGVVIINSLALVETLMDSN-RWAEMFPgmia 437
                          6899*********************9***************9987799999***************************.*********** PP

                          EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTC CS
                START  78 kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksng 160
                          +a+t+evis+g      g lqlm +elq+lsplvp R+++f+R+++q+ +g+w++vdvS++s ++ +  + +v++++lpSg+l+e+++ng
  Kaladp0015s0142.1.p 438 RAATIEVISNGmggtrnGSLQLMHTELQVLSPLVPvREVTFLRFCKQHAEGVWAVVDVSIESVRNSSGAPAYVKCRRLPSGCLVEDMPNG 527
                          ******************************************************************99********************** PP

                          EEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
                START 161 hskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205
                          +skvtwveh++++++ +h+l+r+l++sgl +ga++wvatlqrq +
  Kaladp0015s0142.1.p 528 YSKVTWVEHAEYDESEVHQLYRPLLSSGLGFGAQRWVATLQRQSQ 572
                          ******************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 835 aa     Download sequence    
MSFGGFIDST ASATDGSGPA RFVSDLHFNS SSSDSPSKGM MLSNGVFSPQ QRLVGQTFSK  60
SIFSSPALSL ALQTGLEAQG EVVRIGESYD GGGGGGVSGG VGGRRSREEE HESRSGSDNM  120
DGGSADDLDA ADINPSKKKK KRYHRHTPQQ IQELEALFKE CPHPDEKQRL QLSKRLNLET  180
RQVKFWFQNR RTQMKTQIER HENSMLRSEN DKLRAENMSL REAMRNPMCV HCGGPAIIGE  240
SSLEEQHLRL ENARLRDELE RVCGLASKFL GQPVSALGNG HMLQMCSNLE LGVGNNNCNG  300
GLSTSLPFGP DFGADMFSSS GAVAVNRSAI NNYNATGMDK TPERSVLLEV ALAAMDELIK  360
LAQTDEPLWI KGSEGGREIL NREEYKRTFT PCMGMKPNGY VTEASRETGV VIINSLALVE  420
TLMDSNRWAE MFPGMIARAA TIEVISNGMG GTRNGSLQLM HTELQVLSPL VPVREVTFLR  480
FCKQHAEGVW AVVDVSIESV RNSSGAPAYV KCRRLPSGCL VEDMPNGYSK VTWVEHAEYD  540
ESEVHQLYRP LLSSGLGFGA QRWVATLQRQ SQCLAILMSS AVPSGDNSAI TASGRKSMVK  600
LAQRLTNNFC AGVCASTVHK WNKLSSGNVG DDIRVMTRKS VNDPGEPPGI VLSAATSVWL  660
PVPPQRIFDF LRNESLRSEW DILSNGGPMQ EMARIAKGQD HGNCVSLLRA GAMNPNQSSM  720
LILQETCTDA AGSLVVYAPV DIPAMHVVMN GGDSAYVALL PSGFSIVPDG SSSTVRPRGS  780
NPDGPVEGSL LTVAFQILVS SLPTAKLTVE SVDTVSNLIS CTVQKIKAAL NCEN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61150.10.0HD-ZIP family protein