PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0028.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 129aa    MW: 14454.6 Da    PI: 8.4802
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0028.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260131.73.1e-41101091100
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                          +Ca Ck+l+rkC+++C++apyfp ++p kf nvhk+FG snv+kll++lp+++r+da++s++yeA ar+rdPv+G+v+ i +lq+q++ l
  Kaladp0016s0028.1.p  10 PCACCKFLKRKCPPECIFAPYFPPQDPYKFINVHKIFGSSNVSKLLNELPPHQRSDAVKSMAYEAAARVRDPVHGCVAEICSLQRQVQLL 99 
                          7***************************************************************************************** PP

               DUF260  91 kaelallkee 100
                          ++el++++++
  Kaladp0016s0028.1.p 100 QKELEAANAR 109
                          ****998865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MASSGFFDSP CACCKFLKRK CPPECIFAPY FPPQDPYKFI NVHKIFGSSN VSKLLNELPP  60
HQRSDAVKSM AYEAAARVRD PVHGCVAEIC SLQRQVQLLQ KELEAANARL RNYETLNNYP  120
AYSLPWNG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.21e-56LBD family protein