PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0082.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WOX
Protein Properties Length: 256aa    MW: 29296.4 Da    PI: 6.2872
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0082.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox68.49.3e-2286146257
                          T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                          r+R+t+t++ql++Le+lF + n +ps+++++e++++l    +++e++V++WFqNrRa+ k+
  Kaladp0016s0082.2.p  86 RQRWTPTPQQLQRLEQLFDQgNGTPSKQKIKEITDELtkhgQISETNVYNWFQNRRARSKR 146
                          89*****************99**************************************97 PP
2Wus_type_Homeobox96.52.1e-3185148265
    Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                          ar+RWtPtp+Q++ Le+l+++G  tP+k++i++it eL+++G+i+++NV++WFQNr+aR+++kq
  Kaladp0016s0082.2.p  85 ARQRWTPTPQQLQRLEQLFDQGNGTPSKQKIKEITDELTKHGQISETNVYNWFQNRRARSKRKQ 148
                          789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MEWEKKQTQL AEQNNQAGGG DMYMKVMTDE QMELLRHQIS AYTAISQRLV DMHKTISAQQ  60
DLAGIRLGSL YCDPLMTSAG HKITARQRWT PTPQQLQRLE QLFDQGNGTP SKQKIKEITD  120
ELTKHGQISE TNVYNWFQNR RARSKRKQSV SATHNGDSEV ETEVESPRDK KTKPENIQSF  180
ETSSARLANI YFQNSDVGHD MFHSENGLRS SNDLDHFAVY DNELTNPRFD QFISKIEVPG  240
NFSHFGHDGD YDMIH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140148RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.11e-73WOX family protein