PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0148.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 228aa    MW: 25914.4 Da    PI: 8.6273
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0148.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.93.5e-301059251
                         ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  Kaladp0016s0148.1.p 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59
                         8***********************************************86 PP
2K-box83.16.2e-2876170397
                K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenk 92 
                          ++s++++ e++  +l++e+a++ k+ie L+  +R+llGedL+ ++l+eLq+Leqq+e+s++++R +K+e+++eqie+l++kek+l  en 
  Kaladp0016s0148.1.p  76 SQSKEKVPEEDILHLKTEAANMTKRIELLEAAKRKLLGEDLGACTLEELQKLEQQMERSVTRVRGRKTEVFKEQIERLKEKEKALAAENA 165
                          4555669999******************************************************************************** PP

                K-box  93 aLrkk 97 
                           L +k
  Kaladp0016s0148.1.p 166 ILLEK 170
                          99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS  60
SMQETIQRYQ RQTKDSQSKE KVPEEDILHL KTEAANMTKR IELLEAAKRK LLGEDLGACT  120
LEELQKLEQQ MERSVTRVRG RKTEVFKEQI ERLKEKEKAL AAENAILLEK CGLLSNPRRS  180
NESDEPTRGE AQPADNTEDS QISDVETELF IGPPEQRTKR CSINGSN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.14e-75MIKC_MADS family protein