PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0016s0148.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MIKC_MADS

Protein Properties

Length: 162aa MW: 18747.7 Da PI: 10.3721

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0016s0148.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.8	1.9e-30	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s Kaladp0016s0148.2.p 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 8***********************************************86 PP
2	K-box	75.2	1.8e-25	76	159	3	86
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkeke 86 ++s++++ e++ +l++e+a++ k+ie L+ +R+llGedL+ ++l+eLq+Leqq+e+s++++R +K+e+++eqie+l++k + Kaladp0016s0148.2.p 76 SQSKEKVPEEDILHLKTEAANMTKRIELLEAAKRKLLGEDLGACTLEELQKLEQQMERSVTRVRGRKTEVFKEQIERLKEKVMN 159 4555669999**********************************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS 60 SMQETIQRYQ RQTKDSQSKE KVPEEDILHL KTEAANMTKR IELLEAAKRK LLGEDLGACT 120 LEELQKLEQQ MERSVTRVRG RKTEVFKEQI ERLKEKVMNN V*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	2e-76	MIKC_MADS family protein